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HUMAnN

Description

HUMAnN is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data. This process (functional profiling) aims to describe the metabolic potential of a microbial community and its members.

License

Free to use and open source under MIT License.

Availability

Versions available in Puhti: 3.0.1

Usage

In Puhti, HUMAnN is installed as containerized application. To activate it, run command:

module load humann
humann

More information


Last update: October 10, 2022