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Warning!

Puhti and Mahti will be decommissioned after Roihu becomes available. Users should clean up unnecessary files and move any required data by the end of August 2026. See the Roihu data preparation instructions for details.

Puhti scratch is very full: keep only active data there and move or delete everything else. No new Puhti scratch quota will be granted.

Molden

Molden is a general molecular and electronic structure processing program. It can be used to analyze various results obtained from electronic structure calculations.

Available

  • Puhti: 6.7
  • Mahti: 6.7

License

Usage

Initialize with:

module load molden/6.7

Note, that you need remote graphics to work with Molden. You can either enable X11 forwarding or use the Puhti web interface desktop (recommended).

References

If you use Molden in your work, please cite the following references:

  • G. Schaftenaar, E. Vlieg and G. Vriend, "Molden 2.0: quantum chemistry meets proteins", J Comput. Aided Mol. Des., 31 (2017) 789-800.
  • G. Schaftenaar and J. H. Noordik, "Molden: a pre- and post-processing program for molecular and electronic structures", J. Comput. Aided Mol. Des., 14 (2000) 123-134.

More information