Cutadapt

Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

• Cutadapt
  • License
  • Available
  • Usage
  • Support
  • More information

License

Free to use and open source under MIT License

Available

• Roihu-CPU: 5.1.0

Usage

On Roihu, Cutadapt can be taken in use by loading the module:

module load cutadapt

You can check the available versions with the command:

module spider cutadapt

You can load a specific version with the command:

module load cutadapt/5.1.0

The basic syntax is:

cutadapt --help

Cutadapt should be run either in an interactive session or as a batch job.

Support

CSC Service Desk

More information

• Cutadapt home page.

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