FastQC is a quality control tool for high throughput sequence data.
Free to use and open source under GNU GPLv3.
Version on CSC's Servers
- Puhti: 0:11.8
- Chipster graphical user interface
To initialize in Puhti use:
module load biokit
FastQC is a graphical software so if you use it in Puhti you will need a working X-term connection (FreeNX remote desktop is not yet available in Puhti).