FastQC
Description
FastQC is a quality control tool for high throughput sequence data.
License
Free to use and open source under GNU GPLv3.
Available
Version on CSC's Servers
- Puhti: 0.11.8
- Chipster graphical user interface
Usage
To initialize in Puhti use:
module load biokit
You can then run FastQC:
fastqc --help
If you run FastQC without command line arguments, it will open a GUI. The best way to run a GUI remotely on Puhti is to use the Puhti web interface desktop.
Manual
Last update:
October 10, 2022